Undergraduate Research & Scholarships

Yufan Zhang

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Neural network models have traditionally been viewed as a black box, with tremendous capabilities in a variety of domains, yet with inexplicable inner workings. Past attempts at analyzing neural networks include analyzing model results and learned weights in an effort to design explainable artificial intelligence, as well as early efforts to determine the full capabilities of neural network models. My project seeks to continue in this tradition by investigating the logic-building aspect of neural network models. More specifically, I aim to investigate whether a novel program synthesis neural network model […]

Xiaozhou Zhang

The perception of a stimulus is strongly influenced by the background surrounding it. In mammals, this figure-ground perception to identify stimuli from the environment is crucial for survival, such as detecting predators. My project aims to explore the neural mechanisms behind figure-ground perception, especially focusing on the role of vasointestinal peptide positive (VIP) and somatostatin (SOM) interneurons in the primary visual cortex (V1). To explore the mechanism, I will first develop a novel mice behavioral task that can accurately quantify figure-ground modulation. Then, I will use optogenetics to activate or […]

Luyang Zhang

The phyllosphere, the microbiome of the leaf surface, is a highly tractable model system, and is particularly adept for empirical studies on microbial ecological and evolutionary dynamics. One open question is how prior local adaptation on a plant host influences the efficacy of microbial biological control agents. Using an experimental evolution approach, in which changes in populations are measured over multiple passaging events, a naturally occurring, defensive phyllosphere bacteria, Pantoea dispersa, was evolved on tomato seedlings. Preliminary assays found that this bacterium has evolved increasingly negative effects on seedling health, […]

Emily Zhao

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  Understanding the genetic basis of organ regeneration remains a central challenge in the field of developmental biology. Teeth are a classic model for organogenesis, since many homologous ectodermal organs (e.g., teeth and hair) follow similar patterns of development and regeneration. Threespine stickleback fish are a powerful model organism for studying tooth regeneration in vertebrates because they possess the ancestral dental phenotype of polyphyodonty, in which teeth are continuously replaced throughout adult life. Past research has shown that Foxc1 regulates Bmp6, a gene important for viability, growth, and tooth patterning […]

Angela Sun

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Lung cancer is a leading cause of cancer-related death, even in those who have never smoked cigarettes. In the United States, about 10–15 percent of lung cancers arise in never-smokers, and approximately 17,000 to 26,000 never-smokers die annually from the disease. Despite this fact, knowledge about the epidemiology of lung cancer in never-smokers remains limited. Our proposed study will be the first to elucidate the incidence rates of lung cancer in never-smokers in our integrated health system, specifically addressing differences by sex and race that are not well established in […]

Amy Wu

This research project examines the rich history and future of midwives of color in the Bay Area through the novel implementation of Science, Technology and Society (STS) frameworks. By defining the midwifery model of care conceived by Bay Area midwives of color as a complex sociotechnical system, the process by which midwives of color have created their models of care can be explored at the intersection of the nation’s capitalistic healthcare system, historic attempts to destroy the knowledge produced by grand midwives in the antebellum period and broader African diaspora, […]

Jessica Stewart

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My research focuses on a kinase in the MAPK/ERK pathway called BRAF, which is commonly mutated in cancer. This summer, I will isolate BRAF endogenously from 293FT cells and analyze their structure by native mass spectrometry and cryo-electron microscopy. This strategy differs from most conventional approaches, as I will not overexpress the protein. Rather, I aim to study BRAF isolated from its native stoichiometric environment, circumventing assumptions that must be made with overexpression. With this strategy, I seek to learn about BRAFs activation and native binding interactions. This knowledge could […]

Mihir Shah

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Glioblastoma (GBM) is the most common and lethal primary brain tumor in adults. Although research has enhanced GBM diagnosis and clinical stratification, overall patient outcome has not significantly improved. This is because GBM is incurable with current treatments, which include surgery, radiation therapy, and Temozolomide (TMZ) chemotherapy. The development of CRISPR-Cas9 systems presents opportunities to study human diseases, and it can be leveraged to create therapeutics. Specifically, CRISPR interference (CRISPRi)-based screens help study GBM dependencies and growth vulnerabilities without DNA damage. I have assisted with in vivo and in vitro […]

Rohan Shinkre

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Recent research regarding dengue virus serotypes 1-4 (DENV 1-4) has focused on the human immune systems production of antibodies after infection by the virus. IgG antibodies after primary infection can either protect or mediate viral replication to potentially cause severe dengue disease. These pathogenic antibodies are cross-reactive, but IgG-mediated protection for one serotype of dengue virus will not necessarily protect against the other three serotypes. Most dengue research has focused on IgG antibodies, since it was previously thought that IgM antibodies have low affinity for DENV and may not play […]

Zan Song

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Public procurement is an essential channel for government to buy items at the best possible price and quality. However, many developing countries lack a systematic track of public procurement, leaving space for wrongdoers to engage in improper behavior. Procurement expenditure contributes significantly to GDP, so it is vital to prevent corruption in public procurement and invest money wisely. This project aims to use econometric methodologies to highlight the existence of corruption and collusion problems in Chinese public procurement. This summer I will work under the supervision of Qianmiao Chen to […]